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GWAS-related eQTLs across different cancer types

We identified 337,131 eQTLs that overlap with GWAS linkage disequilibrium (LD) regions (r² ≥ 0.5).



e.g., "STAD"
e.g., "r²>= 0.8"
e.g., "rs2273"
Cancer type
eQTL type
tagSNP
LD
SNP ID
SNP position (hg19)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-value
GWAS-Traits
THYM cis rs2275426 1 rs785471 chr1:46518677 CCDC163P chr1:45960581-45965646:- -0.49 -6 3.55E-8 Body mass index
THYM cis rs2275426 1 rs785479 chr1:46492144 CCDC163P chr1:45960581-45965646:- -0.49 -6.01 3.36E-8 Body mass index
THYM cis rs2275426 1 rs785481 chr1:46554518 CCDC163P chr1:45960581-45965646:- -0.49 -6 3.55E-8 Body mass index
THYM cis rs2275426 1 rs785485 chr1:46574424 CCDC163P chr1:45960581-45965646:- -0.49 -6 3.55E-8 Body mass index
THYM cis rs2275426 1 rs785488 chr1:46576095 CCDC163P chr1:45960581-45965646:- -0.49 -6 3.55E-8 Body mass index
THYM cis rs2275426 1 rs785489 chr1:46576390 CCDC163P chr1:45960581-45965646:- -0.49 -6 3.55E-8 Body mass index
THYM cis rs2275426 1 rs785491 chr1:46583418 CCDC163P chr1:45960581-45965646:- -0.49 -6 3.55E-8 Body mass index
THYM cis rs2275426 1 rs785492 chr1:46583607 CCDC163P chr1:45960581-45965646:- -0.49 -6 3.55E-8 Body mass index
THYM cis rs2275426 1 rs785494 chr1:46586626 CCDC163P chr1:45960581-45965646:- -0.49 -6 3.55E-8 Body mass index
THYM cis rs2275426 1 rs785495 chr1:46587887 CCDC163P chr1:45960581-45965646:- -0.49 -6 3.55E-8 Body mass index
THYM cis rs2275426 1 rs785503 chr1:46595868 CCDC163P chr1:45960581-45965646:- -0.49 -6 3.55E-8 Body mass index
THYM cis rs2275426 1 rs785520 chr1:46568836 CCDC163P chr1:45960581-45965646:- -0.49 -6 3.55E-8 Body mass index
THYM cis rs7849270 1 rs7855278 chr9:131921365 CRAT chr9:131857075-131873070:- -0.43 -5.24 9.76E-7 Blood metabolite ratios
THYM cis rs73726531 1 rs78631584 chr6:18128201 NHLRC1 chr6:18120718-18122851:- -1.1 -4.37 3.12E-5 Thiopurine S-methyltransferase activity
THYM cis rs7849270 1 rs7868408 chr9:131917864 CRAT chr9:131857075-131873070:- 0.38 4.61 1.24E-5 Blood metabolite ratios